Regularization
The plastimatch B-spline registration algorithm features a
second derivative regularization term, which can be computed
either analytically or numerically. Regularization usually improves
both accuracy and vector field smoothness, so you are encouraged to
try it on your problem.
The general form is given as:
System Message: WARNING/2 (c = c_{IM} + \lambda c_{RM}
)
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
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entering extended mode
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Assuming \openin and \input
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Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
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! I can't find file `dehypht-x-2024-02-28.tex'.
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mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
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mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
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[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
where
System Message: WARNING/2 (c )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
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document commands, control, par, spacing, files, font encodings, lengths,
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! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
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l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
is the registration cost that is being optimized.
The cost has two terms: an intensity metric term (
System Message: WARNING/2 (c_{IM} )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
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(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
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(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
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Please type another input file name:
! Emergency stop.
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No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
) and
a regularization metric term (
System Message: WARNING/2 (c_{RM} )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
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(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
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(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
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Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
).
The intensity metric penalizes the images that do not match well,
and the regularization term penalizes vector fields that are not smooth.
The term
System Message: WARNING/2 (\lambda )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
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Local config file fonttext.cfg used
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(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
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(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
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Local config file fontmath.cfg used
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(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
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(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
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(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
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(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
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(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
is used to trade off between image matching
and vector field smoothness. Typical values of
System Message: WARNING/2 (\lambda )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
range between 0.005 and 0.1.
The regularization term used in plastimatch is the square of
the vector field second derivative. For a vector field
System Message: WARNING/2 (u = (u_x, u_y, u_z) )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
, the regularization term is given as:
System Message: WARNING/2 (c_{RM} = \int c_{RM,x} + c_{RM,y} + c_{RM,z}
)
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
where
System Message: WARNING/2 (c_{RM,x}
= \left[ \left( \frac{\partial u^2_x}{\partial x^2} \right)^2
+ \left( \frac{\partial u^2_x}{\partial y^2} \right)^2
+ \left( \frac{\partial u^2_x}{\partial z^2} \right)^2 \right]
+ 2 \times
\left[ \left( \frac{\partial u^2_x}{\partial x \partial y} \right)^2
+ \left( \frac{\partial u^2_x}{\partial x \partial z} \right)^2
+ \left( \frac{\partial u^2_x}{\partial y \partial z} \right)^2 \right].
)
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
The integration is generally defined to be
performed over the domain of the fixed image.
Analytic regularization
The default choice is to perform analytic regularization.
Analytic regularization is generally preferred over numeric regularization
becuase it runs much faster than numeric regularization, and gives
similar results. However, it should be noted that the regularization
is performed over all B-spline tiles that overlap the fixed image,
which is a slightly larger domain of integration than the numeric methods
use.
The method works tile by tile. Each tile is influenced
by 64 control points, which are formed into a vector
System Message: WARNING/2 (v )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
.
Or to be more precise, there are 192 control points, three in each
direction, which are formed into three vectors:
System Message: WARNING/2 (v_x )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
,
System Message: WARNING/2 (v_y )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
, and
System Message: WARNING/2 (v_z )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
.
The smoothness is computed directly from the control points
using a 64x64 matrix
System Message: WARNING/2 (K )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
(/usr/share/texmf-dist/tex/latex/tex-ini-files/latex.ini
(/usr/share/texmf-dist/tex/generic/tex-ini-files/pdftexconfig.tex)
(/usr/share/texmf-dist/tex/latex/base/latex.ltx
(/usr/share/texmf-dist/tex/latex/base/texsys.cfg)
./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
====================================
Local config file fonttext.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fonttext.cfg
(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
(/usr/share/texmf-dist/tex/latex/base/t1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1enc.def)
(/usr/share/texmf-dist/tex/latex/base/ts1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/t1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmr.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmss.fd)
(/usr/share/texmf-dist/tex/latex/base/ot1cmtt.fd)))
====================================
Local config file fontmath.cfg used
====================================
(/usr/share/texmf-dist/tex/latex/base/fontmath.cfg
(/usr/share/texmf-dist/tex/latex/base/fontmath.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlcmm.fd)
(/usr/share/texmf-dist/tex/latex/base/omscmsy.fd)
(/usr/share/texmf-dist/tex/latex/base/omxcmex.fd)
(/usr/share/texmf-dist/tex/latex/base/ucmr.fd)))
====================================
Local config file preload.cfg used
=====================================
(/usr/share/texmf-dist/tex/latex/base/preload.cfg
(/usr/share/texmf-dist/tex/latex/base/preload.ltx)) page nos., x-ref,
environments, center, verbatim, math definitions, boxes, title, sectioning,
contents, floats, footnotes, index, bibliography, output,
===========================================
Local configuration file hyphen.cfg used
===========================================
(/usr/share/texmf-dist/tex/generic/babel/hyphen.cfg
(/usr/share/texmf-dist/tex/generic/hyphen/hyphen.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/dumyhyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
(/usr/share/texmf-dist/tex/generic/hyphen/zerohyph.tex)
! I can't find file `dehypht-x-2024-02-28.tex'.
<to be read again>
\relax
l.192 \repeat
(Press Enter to retry, or Control-D to exit)
Please type another input file name:
! Emergency stop.
<to be read again>
\relax
l.192 \repeat
No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
,
as a quadratic form:
System Message: WARNING/2 (c_{RM} = v_x' K v_x + v_y' K v_y + v_z' K v_z.
)
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
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mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
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This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
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! I can't find file `dehypht-x-2024-02-28.tex'.
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mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
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This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
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The matrix
System Message: WARNING/2 (K )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
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Defining UNIX/DOS style filename parser.
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! I can't find file `dehypht-x-2024-02-28.tex'.
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mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
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mktexfmt [INFO]: total formats: 57
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This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
is precomputed, and can be reused for each tile.
The results are then numerically integrated tile-by-tile over the
fixed image.
Numeric regularization (flavor a)
Numeric regularization flavor “a” uses finite differencing to compute
the derivatives, and then numerically integrates these result over all
voxels.
Numeric regularization (flavor d)
Numeric regularization flavor “d” is a mixed analytic-numeric method.
The derivatives are computed analytically at each voxel, and then
numerically integrated over all voxels.
Stiffness images
If desired, a stiffness image can be used to perform voxel-specific
regularization. At this time, this is supported only for numeric
regularization.
As an example, consider a registration with a sphere as the fixed
image, and a cube as the moving image. A stiffness image has been
created with stiffness of one in the right side of the image
(outlined in blue), and a stiffness of zero elsewhere:
The registration command file is specified to use a stiffness map,
with regularization lambda of 2.5. The penalty in the
right side of the image is therefore
System Message: WARNING/2 (1 \times 2.5 = 2.5 )
latex exited with error
[stderr]
kpathsea: Running mktexfmt latex.fmt
mktexfmt: mktexfmt is using the following fmtutil.cnf files (in precedence order):
mktexfmt: /usr/share/texmf-dist/web2c/fmtutil.cnf
mktexfmt: mktexfmt is using the following fmtutil.cnf file for writing changes:
mktexfmt: /root/.texlive2024/texmf-config/web2c/fmtutil.cnf
mktexfmt [INFO]: writing formats under /usr/share/texmf-var/web2c
mktexfmt [INFO]: --- remaking latex with pdftex
mktexfmt: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini' ...
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (INITEX)
restricted \write18 enabled.
(/usr/share/texmf-dist/web2c/cp227.tcx)
entering extended mode
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./texsys.aux found
\@currdir set to: ./.
Assuming \openin and \input
have the same search path.
Defining UNIX/DOS style filename parser.
catcodes, registers, parameters,
LaTeX2e <2023-11-01> patch level 1
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3.ltx
(/usr/share/texmf-dist/tex/latex/l3kernel/expl3-code.tex)) hacks,
document commands, control, par, spacing, files, font encodings, lengths,
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(/usr/share/texmf-dist/tex/latex/base/fonttext.ltx
=== Don't modify this file, use a .cfg file instead ===
(/usr/share/texmf-dist/tex/latex/base/omlenc.def)
(/usr/share/texmf-dist/tex/latex/base/omsenc.def)
(/usr/share/texmf-dist/tex/latex/base/ot1enc.def)
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! I can't find file `dehypht-x-2024-02-28.tex'.
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No pages of output.
Transcript written on latex.log.
mktexfmt [INFO]: log file copied to: /usr/share/texmf-var/web2c/pdftex/latex.log
mktexfmt [ERROR]: running `pdftex -ini -jobname=latex -progname=latex -translate-file=cp227.tcx *latex.ini >&2 </dev/null' return status: 1
mktexfmt [ERROR]: returning error due to option --strict
mktexfmt [INFO]: disabled formats: 3
mktexfmt [INFO]: not selected formats: 53
mktexfmt [INFO]: failed to build: 1 (pdftex/latex)
mktexfmt [INFO]: total formats: 57
mktexfmt [INFO]: exiting with status 1
[stdout]
This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2024/Alpine Linux) (preloaded format=latex)
restricted \write18 enabled.
I can't find the format file `latex.fmt'!
.:
[GLOBAL]
fixed=cube.mha
moving=sphere.mha
fixed_stiffness=stiffness_image.mha
[STAGE]
xform=bspline
regularization=numeric
regularization_lambda=2.5
The result is an image with uneven regularization: